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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28366913_28367809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28366913 - 28367809

Intron Length:

897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TGTTCTGTATTT

Flanking Amino Acid:

KLRDVAFSLQDSENIDLLFQ

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

73.8

0.59

0.9

26.8

Major PPT

83.1

0.74

0.9

80.5

36.7

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

50.5

0.1

2.2

76.04

41.4

Associated Gene:

Gene:

THADA

Ensembl Gene ID:

ENSAPLG00000010472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010987

28221349 - 28380592

159244