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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28369106_28370066_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28369106 - 28370066

Intron Length:

961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGATCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TCTCCTTTGATC

Flanking Amino Acid:

HPSGILQQYKDFMSSVCDRL

Intron Amino Acid Position:

724

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.8

33.6

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

77.1

0.61

0.8

74.5

35.4

Minor 5ss

36.8

-1.5

2.7

42.7

38.3

Minor BPS

66.7

0.51

1.2

70.57

35.3

Associated Gene:

Gene:

THADA

Ensembl Gene ID:

ENSAPLG00000010472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010987

28221349 - 28380592

159244