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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28370190_28371362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28370190 - 28371362

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTATAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTTGCCTTAGCT

Flanking Amino Acid:

RQQICSSLRKLFCRIQESSQ

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.1

25.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

73.8

0.53

1.1

80.4

36.2

Minor 5ss

39.6

-1.2

2.8

49.5

46.6

Minor BPS

68.5

0.66

1.7

83.67

43.5

Associated Gene:

Gene:

THADA

Ensembl Gene ID:

ENSAPLG00000010472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010987

28221349 - 28380592

159244