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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28371519_28371654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28371519 - 28371654

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGGGG

5'SS Class:

major

3'SS Sequence:

AAATATCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

CTGTGTTTAACA

Flanking Amino Acid:

KQGLVHQHNQVCIDALGLLC

Intron Amino Acid Position:

631

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.1

52.4

41.8

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

71.9

0.49

67.1

43.5

Minor 5ss

26.6

-2.7

3.7

37.3

47.4

Minor BPS

62.5

0.39

1.8

70.38

42.6

Associated Gene:

Gene:

THADA

Ensembl Gene ID:

ENSAPLG00000010472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010987

28221349 - 28380592

159244