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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28375439_28376360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28375439 - 28376360

Intron Length:

922

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAA

U12 Branch Point Sequence:

CTGTTTGTAAGC

Flanking Amino Acid:

KSLLDIQEENRKNSGNRVVQ

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.7

82.6

33.6

Major BPS

62.3

0.31

1.4

63.7

43.9

Major PPT

84.4

0.77

0.7

77.3

31.5

Minor 5ss

21.7

-3.3

3.8

30.8

43.1

Minor BPS

45.4

-0.3

2.2

56.36

43.3

Associated Gene:

Gene:

THADA

Ensembl Gene ID:

ENSAPLG00000010472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010987

28221349 - 28380592

159244