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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28406066_28406487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28406066 - 28406487

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

CTTATGTCAATT

Flanking Amino Acid:

QKLEQQLEEQKQIRLQEAKL

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

81.9

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

31.5

-2.1

2.8

40.7

45.1

Minor BPS

46.6

-0.1

2.2

68.04

43.4

Associated Gene:

Gene:

PLEKHH2

Ensembl Gene ID:

ENSAPLG00000010128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010589

28390406 - 28440072

49667