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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28408052_28408517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28408052 - 28408517

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGTA

5'SS Class:

strong_major

3'SS Sequence:

TACTGTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

AATTGCTGAATT

Flanking Amino Acid:

EMKTVQSKLQEATGKKSVTS

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

83.9

27.1

Major BPS

76.8

0.67

0.9

75.9

Major PPT

80.2

0.68

0.9

77.2

36.8

Minor 5ss

35.6

-1.6

3.4

47.2

Minor BPS

58.8

0.35

1.9

76.7

39.8

Associated Gene:

Gene:

PLEKHH2

Ensembl Gene ID:

ENSAPLG00000010128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010589

28390406 - 28440072

49667