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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28411260_28412277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28411260 - 28412277

Intron Length:

1018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATGTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTATGT

Flanking Amino Acid:

TPPLHRFPSWESRIYAVAKS

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

75.2

35.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.3

0.68

0.9

82.4

Minor 5ss

33.6

-1.9

3.5

46.2

Minor BPS

61.2

0.43

1.9

82.72

39.3

Associated Gene:

Gene:

PLEKHH2

Ensembl Gene ID:

ENSAPLG00000010128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010589

28390406 - 28440072

49667