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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28412354_28412826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28412354 - 28412826

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GTTGCTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

ATTTATACAATG

Flanking Amino Acid:

EAFTVESLNKSAVSLTSYSV

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

76.3

0.65

67.3

39.3

Major PPT

79.6

0.67

0.8

77.4

36.9

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

45.5

-0.4

1.9

56.1

39.4

Associated Gene:

Gene:

PLEKHH2

Ensembl Gene ID:

ENSAPLG00000010128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010589

28390406 - 28440072

49667