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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28416063_28417165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28416063 - 28417165

Intron Length:

1103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCTAAATAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTGTACTTAACT

Flanking Amino Acid:

SSSSTDNGKNEPLEKSGYLL

Intron Amino Acid Position:

710

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

62.6

0.28

1.1

60.3

43.8

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

75.4

0.88

1.5

86.11

39.5

Associated Gene:

Gene:

PLEKHH2

Ensembl Gene ID:

ENSAPLG00000010128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010589

28390406 - 28440072

49667