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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28418257_28418983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28418257 - 28418983

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TATTCTGTAATT

Flanking Amino Acid:

KPTMKGLLTKVKHGYSKRVW

Intron Amino Acid Position:

829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

81.9

0.79

0.9

80.1

Major PPT

78.3

0.64

0.9

74.6

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

65.7

0.57

84.68

36.4

Associated Gene:

Gene:

PLEKHH2

Ensembl Gene ID:

ENSAPLG00000010128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010589

28390406 - 28440072

49667