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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28419065_28422231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28419065 - 28422231

Intron Length:

3167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TATTTACTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATATTTACTT

Flanking Amino Acid:

LYYFRNQEDKFPLGQIKLFE

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

70.6

37.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

85.3

0.79

0.8

82.4

Minor 5ss

34.1

-1.8

3.1

44.9

43.1

Minor BPS

53.1

0.18

1.8

70.78

40.4

Associated Gene:

Gene:

PLEKHH2

Ensembl Gene ID:

ENSAPLG00000010128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010589

28390406 - 28440072

49667