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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28427744_28429544_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28427744 - 28429544

Intron Length:

1801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACCGG

5'SS Class:

major

3'SS Sequence:

TCCTTTTGTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAA

U12 Branch Point Sequence:

ATGTTTGAAACA

Flanking Amino Acid:

HPQNQTGPIQGLQLLALCVG

Intron Amino Acid Position:

1050

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

56.9

47.7

Major BPS

65.4

0.38

1.4

75.9

36.3

Major PPT

82.1

0.72

0.9

75.9

Minor 5ss

36.6

-1.5

3.1

47.7

47.8

Minor BPS

45.8

-0.3

2.2

60.2

40.7

Associated Gene:

Gene:

PLEKHH2

Ensembl Gene ID:

ENSAPLG00000010128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010589

28390406 - 28440072

49667