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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28433492_28434229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28433492 - 28434229

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCCTG

5'SS Class:

major

3'SS Sequence:

GTCTTACCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

GTGGTCTTACCC

Flanking Amino Acid:

AMELTALLAQVEIGDFERPF

Intron Amino Acid Position:

1274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

65.5

45.9

Major BPS

61.3

0.28

30.6

Major PPT

68.6

0.42

0.8

33.3

Minor 5ss

41.6

-0.9

3.1

56.4

47.8

Minor BPS

53.1

0.08

1.8

62.03

43.7

Associated Gene:

Gene:

PLEKHH2

Ensembl Gene ID:

ENSAPLG00000010128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010589

28390406 - 28440072

49667