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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28437002_28438713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28437002 - 28438713

Intron Length:

1712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTGCATTGACCT

Flanking Amino Acid:

GISILDYSTMRLTVTYTYKS

Intron Amino Acid Position:

1395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

84.9

0.78

0.9

90.5

22.3

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

46.6

-0.1

1.9

67.19

43.4

Associated Gene:

Gene:

PLEKHH2

Ensembl Gene ID:

ENSAPLG00000010128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010589

28390406 - 28440072

49667