Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_28478240_28479117_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28478240 - 28479117

Intron Length:

878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATTAC

5'SS Class:

major

3'SS Sequence:

TTTGCCCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GTTGCTACAATG

Flanking Amino Acid:

IHQPRSELFRLFDKIAIMSF

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

71.7

34.8

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

76.2

0.59

0.8

69.5

31.3

Minor 5ss

39.4

-1.2

2.9

43.7

44.2

Minor BPS

45.5

-0.4

1.9

53.07

42.2

Associated Gene:

Gene:

ABCG5

Ensembl Gene ID:

ENSAPLG00000009909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010341

28468188 - 28483354

15167