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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28479258_28480770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28479258 - 28480770

Intron Length:

1513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGAGTTTTAATG

Flanking Amino Acid:

SIAAQLLQDPKVMLLDEPTT

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.7

0.58

0.9

37.2

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

55.7

0.04

1.4

55.88

40.3

Associated Gene:

Gene:

ABCG5

Ensembl Gene ID:

ENSAPLG00000009909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010341

28468188 - 28483354

15167