Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_28488039_28488462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28488039 - 28488462

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATTAAG

5'SS Class:

major

3'SS Sequence:

TGGATCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ACTGTTTTATCC

Flanking Amino Acid:

FFSDSQREKRVEDVIAELRL

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

70.7

41.1

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

65.2

0.34

55.1

41.2

Minor 5ss

34.7

-1.7

2.6

34.2

41.4

Minor BPS

50.1

-0

1.7

59.25

40.7

Associated Gene:

Gene:

ABCG8

Ensembl Gene ID:

ENSAPLG00000009721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010131

28483082 - 28496858

13777