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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28531967_28534489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28531967 - 28534489

Intron Length:

2523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

AATCTTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GAATCTTAAATC

Flanking Amino Acid:

EMYYHLLQLCENNSDWSKAE

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

72.9

34.4

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

77.1

0.61

73.6

40.9

Minor 5ss

43.3

-0.7

2.9

52.2

Minor BPS

55.4

0.15

1.6

60.95

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009368

28507401 - 28564582

57182