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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28549480_28556997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28549480 - 28556997

Intron Length:

7518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCATGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTC

Flanking Amino Acid:

YSPLITVHLEKDDMPAALEA

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

77.7

33.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.32

1.7

79.1

34.3

Minor 5ss

47.2

-0.3

2.9

64.7

Minor BPS

61.5

0.34

1.5

70.16

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009368

28507401 - 28564582

57182