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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28582926_28583650_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28582926 - 28583650

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTCTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AATTAAAAAAAA

Flanking Amino Acid:

YCNEGDIEGASKILGFMKSK

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

73.3

38.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

96.4

1.04

0.5

95.9

14.1

Minor 5ss

70.8

0.7

2.2

82.3

37.4

Minor BPS

38.9

-0.8

2.1

52.15

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038809

28582382 - 28597878

15497