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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28683890_28693086_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

28683890 - 28693086

Intron Length:

9197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

GAGTAGCTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

84.7

0.78

0.8

77.7

36.7

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

-0.3

2.4

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048047

28683501 - 28724987

41487

ENSAPLT00000017580

28683501 - 28721551

38051