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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28701029_28702852_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28701029 - 28702852

Intron Length:

1824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTCCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

GGAATTATAACT

Flanking Amino Acid:

STFLKRSSKEIRYCINMGAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.1

71.6

40.2

Major BPS

77.9

0.69

78.3

31.3

Major PPT

0.77

0.8

75.9

Minor 5ss

-1.1

2.8

51.5

44.9

Minor BPS

49.1

0.01

1.6

64.03

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023334

28693087 - 28724987

31901

ENSAPLT00000009205

28693087 - 28720706

27620