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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28703717_28705758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28703717 - 28705758

Intron Length:

2042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

AAAAGCCTAACT

Flanking Amino Acid:

NWVVDTCLHKGSRDNMSIVL

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

69.4

0.44

0.9

64.8

36.5

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

47.7

-0.1

2.1

66.62

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023334

28693087 - 28724987

31901

ENSAPLT00000017580

28683501 - 28721551

38051

ENSAPLT00000048047

28683501 - 28724987

41487

ENSAPLT00000009205

28693087 - 28720706

27620

ENSAPLT00000028715

28693700 - 28715513

21814

ENSAPLT00000027602

28685799 - 28715513

29715