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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28715460_28721245_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28715460 - 28721245

Intron Length:

5786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

AATCTTAAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TGAATCTTAAAA

Flanking Amino Acid:

RLNPHRENEGDPGEAEESGT

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

82.3

32.2

Major BPS

77.9

0.69

0.8

75.9

Major PPT

50.3

0.01

1.2

51.2

40.2

Minor 5ss

44.3

-0.6

2.8

53.4

43.8

Minor BPS

61.8

0.37

1.4

67.22

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017580

28683501 - 28721551

38051