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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28715460_28723125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28715460 - 28723125

Intron Length:

7666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TGAGTAGTAATA

Flanking Amino Acid:

RLNPHRENEGGAGDLEDPW*

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

82.3

32.2

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

81.8

0.72

0.7

77.6

24.4

Minor 5ss

44.3

-0.6

2.8

53.4

43.8

Minor BPS

42.6

-0.5

2.2

53.33

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048047

28683501 - 28724987

41487

ENSAPLT00000023334

28693087 - 28724987

31901