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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28738978_28740115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28738978 - 28740115

Intron Length:

1138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTACATGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

CTTACATGAACA

Flanking Amino Acid:

GAAIAVPNNWVSVYGNSSWQ

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

63.6

0.31

1.1

58.5

40.9

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

56.6

0.2

1.8

70.67

40.9

Associated Gene:

Gene:

SLC3A1

Ensembl Gene ID:

ENSAPLG00000008564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008926

28735270 - 28750393

15124

ENSAPLT00000029013

28736490 - 28750393

13904