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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28740242_28743210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28740242 - 28743210

Intron Length:

2969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

CTCACTTGAAAC

Flanking Amino Acid:

RNLAVQQEIHDIIKFWLGKG

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

65.8

0.39

57.3

39.4

Major PPT

74.4

0.55

0.9

68.4

37.4

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

49.1

-0

1.6

56.97

41.6

Associated Gene:

Gene:

SLC3A1

Ensembl Gene ID:

ENSAPLG00000008564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029013

28736490 - 28750393

13904

ENSAPLT00000008926

28735270 - 28750393

15124