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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28746584_28749029_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28746584 - 28749029

Intron Length:

2446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTATTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

CGGCTCTAAACC

Flanking Amino Acid:

IGMENIASENVTFPEKSPMQ

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

79.7

28.2

Major BPS

75.1

0.62

65.6

Major PPT

88.3

0.86

0.7

80.5

36.7

Minor 5ss

34.4

-1.8

3.3

44.6

43.6

Minor BPS

49.4

-0

1.7

55.7

42.7

Associated Gene:

Gene:

SLC3A1

Ensembl Gene ID:

ENSAPLG00000008564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029013

28736490 - 28750393

13904

ENSAPLT00000008926

28735270 - 28750393

15124