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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28757270_28758620_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28757270 - 28758620

Intron Length:

1351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

CTTACTTGAAAT

Flanking Amino Acid:

FVSHSVQSIKLPAWACAFEL

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

82.4

0.73

0.8

80.5

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

57.8

0.32

1.6

74.94

41.5

Associated Gene:

Gene:

PREPL

Ensembl Gene ID:

ENSAPLG00000008267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025955

28751761 - 28769185

17425

ENSAPLT00000008632

28750752 - 28769185

18434