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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28763130_28764360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28763130 - 28764360

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TTGACATGCATT

Flanking Amino Acid:

EKVIPNVFSFEWVSNDVLYY

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.5

41.1

Major BPS

67.6

0.44

1.2

Major PPT

87.6

0.85

0.8

80.2

37.3

Minor 5ss

45.7

-0.5

2.9

61.8

44.9

Minor BPS

44.7

-0.3

2.1

66.83

43.8

Associated Gene:

Gene:

PREPL

Ensembl Gene ID:

ENSAPLG00000008267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025955

28751761 - 28769185

17425

ENSAPLT00000008632

28750752 - 28769185

18434