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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28765965_28768685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28765965 - 28768685

Intron Length:

2721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTATTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

CTTTCCTTATTT

Flanking Amino Acid:

ILPWRFFSCKQEGTEIPCKI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

78.8

0.72

67.9

40.1

Major PPT

81.9

0.72

0.8

81.8

Minor 5ss

41.3

-1

2.9

58.1

46.1

Minor BPS

74.6

0.85

1.6

87.57

38.6

Associated Gene:

Gene:

PREPL

Ensembl Gene ID:

ENSAPLG00000008267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025955

28751761 - 28769185

17425

ENSAPLT00000008632

28750752 - 28769185

18434