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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28784577_28946275_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28784577 - 28946275

Intron Length:

161699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTCAT

5'SS Class:

major

3'SS Sequence:

TTTTGTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TGTTCTAAGAAT

Flanking Amino Acid:

LTSFDNTGNVCLWPAEEVLA

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.1

71.3

40.3

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

85.6

0.8

0.9

79.9

37.7

Minor 5ss

38.8

-1.3

3.1

60.2

44.1

Minor BPS

46.4

-0.2

69.84

Associated Gene:

Gene:

CAMKMT

Ensembl Gene ID:

ENSAPLG00000008229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008553

28769870 - 28988947

219078