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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28950450_28955618_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

28950450 - 28955618

Intron Length:

5169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATCCTTA

5'SS Class:

strong_minor

3'SS Sequence:

AAGTATGCTACAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

AAATTCTTAACA

Flanking Amino Acid:

LTDGNEKAIKNVSDIIARNQ

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.2

61.4

40.1

Major BPS

82.2

0.8

71.9

35.8

Major PPT

63.5

0.3

1.1

54.5

44.8

Minor 5ss

87.6

1.27

1.2

81.2

32.7

Minor BPS

76.2

0.82

1.1

75.89

34.4

Associated Gene:

Gene:

CAMKMT

Ensembl Gene ID:

ENSAPLG00000008229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008553

28769870 - 28988947

219078

ENSAPLT00000037446

28769870 - 28988798

218929

ENSAPLT00000032027

28877020 - 29011030

134011

ENSAPLT00000027076

28876818 - 28988947

112130

ENSAPLT00000026205

28784512 - 28988798

204287