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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29032384_29049363_F

Intron Information:

Intron Rank:

145007

Intron Class:

major

Intron Phase:

Intron Coordinates:

29032384 - 29049363

Intron Length:

16980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

ATTCCTTGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.6

35.7

Major BPS

71.5

0.53

1.1

43.2

Major PPT

86.3

0.82

0.8

80.6

31.4

Minor 5ss

30.2

-2.3

3.3

39.6

46.4

Minor BPS

70.9

0.73

1.4

85.15

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028201

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022752

29031591 - 29049978

18388