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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29120431_29122689_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29120431 - 29122689

Intron Length:

2259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGGG

5'SS Class:

major

3'SS Sequence:

CGGCGCGATGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGAGAG

U12 Branch Point Sequence:

GTTGTTTTGTCT

Flanking Amino Acid:

QRDRAAAAKNRLQHQAIGQS

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

67.1

44.6

Major BPS

41.2

-0.5

1.5

35.8

41.9

Major PPT

0.11

1.1

46.4

40.6

Minor 5ss

27.5

-2.6

2.9

32.4

42.2

Minor BPS

-0.5

3.4

70.47

41.3

Associated Gene:

Gene:

SIX3

Ensembl Gene ID:

ENSAPLG00000016526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020445

29119667 - 29123515

3849