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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29347940_29356219_R

Intron Information:

Intron Rank:

129543

Intron Class:

major

Intron Phase:

Intron Coordinates:

29347940 - 29356219

Intron Length:

8280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTATCTTTACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

72.9

0.51

0.9

67.1

39.3

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

71.5

0.67

1.5

79.94

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039341

29346537 - 29356347

9811