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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29495634_29497048_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29495634 - 29497048

Intron Length:

1415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TTCTTTTATTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCTTTTATTT

Flanking Amino Acid:

DKDTLDFIRKLCQQRYICIQ

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

32.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.5

0.78

0.8

85.3

28.3

Minor 5ss

47.3

-0.3

2.8

67.6

37.4

Minor BPS

62.9

0.48

1.5

80.46

35.9

Associated Gene:

Gene:

SRBD1

Ensembl Gene ID:

ENSAPLG00000006313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038221

29383646 - 29504603

120958

ENSAPLT00000031445

29383646 - 29504603

120958

ENSAPLT00000006571

29384294 - 29504603

120310

ENSAPLT00000045539

29384256 - 29505595

121340