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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29497146_29499381_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29497146 - 29499381

Intron Length:

2236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATA

Flanking Amino Acid:

LFSYIRPNVKGLANIQEVEA

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.3

0.5

0.9

76.6

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

66.5

0.51

1.5

77.98

32.4

Associated Gene:

Gene:

SRBD1

Ensembl Gene ID:

ENSAPLG00000006313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038221

29383646 - 29504603

120958

ENSAPLT00000031445

29383646 - 29504603

120958

ENSAPLT00000006571

29384294 - 29504603

120310

ENSAPLT00000045539

29384256 - 29505595

121340