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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2954129_2960758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2954129 - 2960758

Intron Length:

6630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCACCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTTTTTTCCACC

Flanking Amino Acid:

DITADFVFSEEHKCPVDQRE

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

81.1

0.7

0.8

74.4

35.4

Minor 5ss

-2.2

3.3

45.6

Minor BPS

0.14

73.67

37.7

Associated Gene:

Gene:

LAMP5

Ensembl Gene ID:

ENSAPLG00000014591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015208

2953950 - 2963355

9406