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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29547880_29548547_R

Intron Information:

Intron Rank:

138259

Intron Class:

major

Intron Phase:

Intron Coordinates:

29547880 - 29548547

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTGGTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

78.9

0.65

0.8

73.7

31.3

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

53.1

0.18

1.7

70.24

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047437

29546664 - 29548698

2035