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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2960948_2962388_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2960948 - 2962388

Intron Length:

1441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGAGCC

5'SS Class:

major

3'SS Sequence:

GCCCCTTGGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTGAC

U12 Branch Point Sequence:

AGGGCTTGACCT

Flanking Amino Acid:

ERTYFKDAVSPGKHTANSHR

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.3

58.2

39.8

Major BPS

56.2

0.15

1.3

44.3

Major PPT

59.1

0.21

1.1

52.6

41.6

Minor 5ss

33.6

-1.9

3.4

47.8

41.1

Minor BPS

-0.2

1.8

59.51

Associated Gene:

Gene:

LAMP5

Ensembl Gene ID:

ENSAPLG00000014591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015208

2953950 - 2963355

9406