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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2963025_2963352_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2963025 - 2963352

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCCGGGGGG

5'SS Class:

major

3'SS Sequence:

CCTGGCTGCCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAGAC

U12 Branch Point Sequence:

TCTGCCTGCAGA

Flanking Amino Acid:

MQEVENLSGLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.2

54.5

39.7

Major BPS

49.6

-0

1.1

46.4

38.9

Major PPT

46.2

-0.2

1.7

45.3

41.4

Minor 5ss

12.5

-4.3

3.7

16.8

31.9

Minor BPS

45.1

-0.3

2.2

59.45

46.4

Associated Gene:

Gene:

LAMP5

Ensembl Gene ID:

ENSAPLG00000014591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015208

2953950 - 2963355

9406