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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29652215_29731219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29652215 - 29731219

Intron Length:

79005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGACT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTTTTTATTC

Flanking Amino Acid:

IIDLSGSSGEAPKDNEERVF

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

76.1

39.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.6

0.76

0.9

36.2

Minor 5ss

33.5

-1.9

3.5

Minor BPS

61.5

0.34

1.5

70.06

35.9

Associated Gene:

Gene:

PRKCE

Ensembl Gene ID:

ENSAPLG00000006475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043547

29551459 - 29842123

290665

ENSAPLT00000006760

29551459 - 29832269

280811