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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29732591_29734125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29732591 - 29734125

Intron Length:

1535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTCTTACAG

Flanking Amino Acid:

VIGKQGYQCQVCTCVVHKRC

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

96.2

1.04

0.5

91.9

19.1

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

63.2

0.28

1.8

72.05

40.8

Associated Gene:

Gene:

PRKCE

Ensembl Gene ID:

ENSAPLG00000006475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006760

29551459 - 29832269

280811

ENSAPLT00000043547

29551459 - 29842123

290665