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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29736575_29739464_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29736575 - 29739464

Intron Length:

2890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

CATTTCATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCTTTACAT

Flanking Amino Acid:

GLLRQGLQCKVCKMNVHRRC

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

80.5

0.69

0.9

74.2

34.8

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

66.1

0.58

1.7

83.47

37.5

Associated Gene:

Gene:

PRKCE

Ensembl Gene ID:

ENSAPLG00000006475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043547

29551459 - 29842123

290665

ENSAPLT00000006760

29551459 - 29832269

280811