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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29744182_29791311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29744182 - 29791311

Intron Length:

47130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

TAATTAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

GTTTAATTAATT

Flanking Amino Acid:

TQLYCCFQTKDRLFFVMEYV

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.4

32.4

Major BPS

0.82

0.8

24.9

Major PPT

75.4

0.57

71.7

42.5

Minor 5ss

44.1

-0.6

2.9

58.3

46.6

Minor BPS

64.9

0.55

1.8

83.4

37.1

Associated Gene:

Gene:

PRKCE

Ensembl Gene ID:

ENSAPLG00000006475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006760

29551459 - 29832269

280811

ENSAPLT00000043547

29551459 - 29842123

290665