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Intron Name: Anas_platyrhynchos_platyrhynchos_3_298588_299331_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

298588 - 299331

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

ATATCTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

GGTCTCATATCT

Flanking Amino Acid:

VQRRPVKNKTDFLVPLLSSV

Intron Amino Acid Position:

1074

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.3

32.2

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

79.4

0.66

0.9

70.4

40.4

Minor 5ss

48.4

-0.1

2.8

67.4

Minor BPS

48.2

-0

1.9

68.05

42.1

Associated Gene:

Gene:

JAG1

Ensembl Gene ID:

ENSAPLG00000009296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009806

298130 - 331665

33536