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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2990753_2997632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2990753 - 2997632

Intron Length:

6880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATCA

5'SS Class:

strong_major

3'SS Sequence:

TACTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

AGCAACCTAATT

Flanking Amino Acid:

LNALKKKHAKEHSAMQKLHC

Intron Amino Acid Position:

949

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.1

31.9

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

81.4

0.71

0.9

72.8

Minor 5ss

44.3

-0.6

2.8

57.2

47.1

Minor BPS

46.9

-0.1

1.8

41.6

Associated Gene:

Gene:

PLCB4

Ensembl Gene ID:

ENSAPLG00000013577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014232

2968731 - 3058313

89583