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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29938222_29949332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29938222 - 29949332

Intron Length:

11111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

AGATTTTTAGAT

Flanking Amino Acid:

FLRTHKLLSSVCADNENELD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

35.5

Major BPS

79.2

0.72

Major PPT

95.5

1.02

0.5

95.9

14.1

Minor 5ss

39.4

-1.2

3.3

57.2

Minor BPS

49.7

0.06

1.6

65.04

39.2

Associated Gene:

Gene:

EPAS1

Ensembl Gene ID:

ENSAPLG00000007160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027933

29890219 - 29973325

83107

ENSAPLT00000007487

29894709 - 29973325

78617

ENSAPLT00000039651

29933564 - 29973325

39762